发表论文

1) W Chen, G Zhang, J Li, X Zhang, S Huang, S Xiang, X Hu*, C Liu*. CRISPRlnc: a manually curated database of validated sgRNAs for lncRNAs. Nucleic Acids Res (2018). (影响因子11.56, Top5%)

2) X Hu, W Chen, J Li, S Huang, X Xu, X Zhang, S Xiang*, C Liu*. ZFLNC: a comprehensive and well-annotated database for zebrafish lncRNA. Database (2018). (影响因子3.98, Top10%)

3) W Chen, X Zhang, J Li, S Huang, S Xiang, X Hu*, C Liu*. Comprehensive analysis of coding-lncRNA gene co-expression network uncovers conserved functional lncRNAs in zebrafish. BMC Genomics (2018). (影响因子 3.73,Q1)

4) Y Li, L He, J Li, J Chen*, C Liu*. Genome-wide Identification, Characterization and Expression Profiling of the Legume BZR Transcription Factor Gene Family. Frontiers in Plant Science (2018). (影响因子 3.68,Q1)

5) P Wang, J Li, X Gao, D Zhang, A Li, C Liu*. Genome-Wide Screening and Characterization of the Dof Gene Family in Physic Nut (Jatropha curcas L.). Int. J. Mol. Sci. (2018). (影响因子 3.69,Q2)

6) X Zhang, J Wang, J Li, W Chen and C Liu*. CRlncRC: a novel machine learning method for cancer-related long noncoding RNA identification based on integrated features. BMC Medical Genomics (影响因子 3.32, Q2, Accepted)

7) X Gao, X Zhang, H Meng, J Li, D Zhang, C Liu*. Comparative chloroplast genomes of Paris Sect. Marmorata: insights into repeat regions and evolution implications. BMC Genomics (影响因子 3.73, Q1, Accepted)

8) J Wang, X Zhang, W Chen, J Li* and C Liu*. CRlncRNA: a manually curated database of cancer-related long non-coding RNAs with experimental proof of functions on clinicopathological and molecular features. BMC Medical Genomics (影响因子 3.32, Q2, Accepted)

9) X Li, F Liang, C Liu, L Zhang, Y Li, Y Li, S Chen*, J Xiong*. Comparison of the Prognostic Utility of the Diverse Molecular Data among lncRNA, DNA Methylation, microRNA, and mRNA across Five Human Cancers. PloS One (2015). (影响因子 2.77,Q1)

10) W Zhang, S Cao, L Qiu, F Qi, Z Li, Y Yang, S Huang, F Bai, C Liu, X Wan*, and S Li*. Functional Characterization of MpaG’, the OMethyltransferase Involved in the Biosynthesis of Mycophenolic Acid. ChemBioChem (2015). (影响因子 2.77,Q2)

11) Li, J., Z. Xuan and C. Liu*. “Long Non-Coding Rnas and Complex Human Diseases.” Int J Mol Sci 14, no. 9 (2013): 18790-808. (影响因子 3.69 invited review)

12) Liao, Q., H. Xiao, …, Z. Wu, C. Liu* and Y. Zhao*. “Ncfans: A Web Server for Functional Annotation of Long Non-Coding Rnas.” Nucleic Acids Res 39, no. Web Server issue (2011): W118-24. (影响因子 11.56)

13) Liao, Q.#, C. Liu#, X. Yuan, et al. “Large-Scale Prediction of Long Non-Coding Rna Functions in a Coding-Non-Coding Gene Co-Expression Network.” Nucleic Acids Res 39, no. 9 (2011): 3864-78. (影响因子11.56)

14) Liu, C.*, J. Li and Y. Zhao. “Exploring Hierarchical and Overlapping Modular Structure in the Yeast Protein Interaction Network.” BMC Genomics 11 Suppl 4, (2010): S17. (影响因子 3.73)

15) Yuan, X.#, C. Liu#, P. Yang, et al. “Clustered Micrornas’ Coordination in Regulating Protein-Protein Interaction Network.” BMC Syst Biol 3, (2009): 65. (影响因子 2.05)

16) He, S.#, H. Su#, C. Liu#, G. Skogerbo, et al. “Microrna-Encoding Long Non-Coding Rnas.” BMC Genomics 9, (2008): 236. (影响因子 3.73)

17) Zhao, Y.#, S. He#, C. Liu#, S. Ru, et al. “Microrna Regulation of Messenger-Like Noncoding Rnas: A Network of Mutual Microrna Control.” Trends Genet 24, no. 7 (2008): 323-7. (影响因子10.56)

18) He, S.#, C. Liu#, G. Skogerbo, et al. “Noncode V2.0: Decoding the Non-Coding.” Nucleic Acids Res 36, no. Database issue (2008): D170-2. (影响因子11.56)

19) Zhang, Z.#, C. Liu#, G. Skogerbo, et al. “Dynamic Changes in Subgraph Preference Profiles of Crucial Transcription Factors.” PLoS Comput Biol 2, no. 5 (2006): e47. (影响因子3.96)

20) Liu, C., B. Bai, et al. “Noncode: An Integrated Knowledge Database of Non-Coding Rnas.” Nucleic Acids Res 33, no. Database issue (2005): D112-5. (影响因子11.56)