李菁的个人简介

教育简历
2003.9-2009.7:清华大学生命科学院,分子免疫学,博士
2000.9-2003.7:中国医学科学院北京协和医科大学,生物化学和分子生物学,硕士
1996.9-2000.7:武汉大学,生物学国家基地班,本科

工作简历
2016.5-至今:中国科学院西双版纳热带植物园,助理研究员
2015.11-2016.5:北京合生基因科技有限公司,分子部主管
2013.7-2015.10:清华大学医学院,博士后
2013.1-2013.6: 清华大学医学院,研究助理
2010.1-2012.12:中国科学院计算技术研究所,研究助理

 

1) Chen W. #, Zhang G. #, Li J.#, … , Hu X.*, C. Liu *. CRISPRlnc: a manually curated database of validated sgRNAs for lncRNAs. Nucleic Acids Res (2018).
2) Hu X. #, Chen W. #, Li J. #, … , Xiang S.*, C. Liu *. ZFLNC: a comprehensive and well-annotated database for zebrafish lncRNA. Database (2018).
3) Chen, W. #, Zhang, X. #, Li, J. #, …, Hu, X.*, C. Liu*. Comprehensive analysis of coding-lncRNA gene co-expression network uncovers conserved functional lncRNAs in zebrafish. BMC Genomics (2018).
4) Zhang, X.#, Wang, J.#, Li, J.#, …, C. Liu*. CRlncRC: a novel machine learning method for cancer-related long noncoding RNA identification based on integrated features. BMC Medical Genomics
5) Wang, J., Zhang, X., …, Li, J.*, C. Liu*. CRlncRNA: a manually curated database of cancer-related long non-coding RNAs with experimental proof of functions on clinicopathological and molecular features. BMC Medical Genomics
6) Li, Y., He, L., Li, J., …, C. Liu*. Genome-wide Identification, Characterization and Expression Profiling of the Legume BZR Transcription Factor Gene Family. Frontiers in Plant Science (2018).
7) Wang, P., Li, J., …, C. Liu*. Genome-Wide Screening and Characterization of the Dof Gene Family in Physic Nut (Jatropha curcas L.). Int. J. Mol. Sci. (2018).
8) Li J#, Xuan Z*, Liu C*. Long non-coding RNAs and complex human diseases. Int J Mol Sci. 2013 Sep 12;14(9):18790-808.
9) Zhao G, Bu D, Liu C, Li J, Yang J, Liu Z, Zhao Y, Chen R*. CloudLCA: finding the lowest common ancestor in metagenome analysis using cloud computing. Protein Cell. 2012 Feb;3(2):148-52.
10) Liu C#, Li J#, Zhao Y*. Exploring hierarchical and overlapping modular structure in the yeast protein interaction network. BMC Genomics. 2010 Dec 2;11 Suppl 4:S17.
11) Wu F, Yuan XY, Li J, Chen YH*. The co-administration of CpG-ODN influenced protective activity of influenza M2e vaccine. Vaccine. 2009 Jul 9;27(32):4320-4.
12) Li J#, Chen X#, Huang J, Jiang S*, Chen YH*. Identification of critical antibody-binding sites in the HIV-1 gp41 six-helix bundle core as potential targets for HIV-1 fusion inhibitors. Immunobiology. 2009;214(1):51-60.
13) Li J, Chen X, Jiang S*, Chen YH*. Deletion of fusion peptide or destabilization of fusion core of HIV gp41 enhances antigenicity and immunogenicity of 4E10 epitope. Biochem Biophys Res Commun. 2008 Nov 7;376(1):60-4.
14) Huang JH, Yang HW, Liu S, Li J, Jiang S*, Chen YH*. The mechanism by which molecules containing the HIV gp41 core-binding motif HXXNPF inhibit HIV-1 envelope glycoprotein-mediated syncytium formation. Biochem J. 2007 May 1;403(3):565-71.